Google Summer of Code 2010!

The Google Summer of Code program is a way for Google to contribute to the open source community by funneling student man hours during (the so-called American) summer break. It grants to students 5000 USD (wow) of stipend upon completion of the program in exchange of doing an open source project (and motivating you to stay contributing after GSoC ends of course!). Needless to say, I am accepted as one of the students for GSoC :)

I will be working on creating a round-trip converter for http://wikipathways.org and http://reactome.org so both websites can share pathway data to and from each other. It sounds simple (well it usually is in computing) but in practice the two websites use quite radically different XML formats. Nevertheless I am really glad to be able to work on a programming project that is also related to my major. Intersection of interests to the fullest.

So for my personal documentation and also for your interest, I am attaching the proposal here. The first proposal is the one that I eventually will implement, although from my correspondence among the mentoring organizations it appears that the other proposal was also accepted (but students obviously cannot work on two projects at once, so yeah). The .rst files are the source code in reStructuredText format. 

If everything goes well I will most likely post weekly reports of the project on this blog. The non-chronological progress will also be posted on this GenMAPP wiki page.

I'm looking forward to a GREAT and very exciting 3-months break!

AttachmentSize
Reactome-Wikipathways round-trip converter.html16.94 KB
Reactome-Wikipathways round-trip converter.rst7.74 KB
Multiple language support for autodoc in Sphinx via ANTLR.html23.7 KB
Multiple language support for autodoc in Sphinx via ANTLR.rst11.22 KB

13 comments

Pingback. [...] Leontius – http://leapon.net/en/google-summer-code-2010 [...]
Pingback. [...] • Semantic Network Summary for Cytoscape, by Layla Oesper • Reactome-WikiPathways Converter, by Leontius Pradhana • Edge-Weighted Layout for Cytoweb, by Tomithy [...]
I commend the edifying.

I commend the edifying article you specify in your articles. I'll bookmark your blog and father my friends scrutiny up in your blog frequently.
http://www.simplyrest.com/

Agen Bola.

Hello, i am glad to read the whole content of this blog and am very excited and happy to say that the webmaster has done a very good job here to put all the information content and information at one place.

レンズが凹レンズになることもある。また、近視の目は老眼にな.

レンズが凹レンズになることもある。また、近視の目は老眼にならないなどと言われるがそれは間違いで、近視の目でも一般に40歳程度の年齢を過ぎれば、遠距離が明視でBURBERRY BU9124 レディース シルバーきる眼鏡やコンタクトレンズを装用したままでは徐々

Key Organizations in Free .

Now in its third year since launching in 2005, the Google Summer of Code gives student software developers an opportunity to gain Redovisning Stockholm practical experience creating open-source programs or helping with established projects.

obat tradisional kanker pankreas.

日本では猫がいる家より、obat tradisional kanker pankreas 犬がいる家のほうが多いのではないだろうか。犬は大体玄関の近くか、庭にいる。そして obat kelenjar tiroid 、知らない人がその家の前を通ると。「ワンワン、 ワンワン」と大変うるさい。犬に「ワンワン」と鳴かれて困ったことがある人は、 大勢いるだろうと思う。うるさい犬をどうしたら静かにさせられることが教えよう。cara order ace maxs 犬が「ワン」と言ったら、あなたはすぐ「ツー」と言えば良い。obat jantung koroner terampuh
そうすれば、犬は次の「スリー」が言えないので、静かにするしかないのだ。

obat kelenjar tiroid.

The first objective will be to relieve the pain and inflammation of the current gout attack. Once the gout attack is under control, which can take a few hours or a couple of days, you and your doctor will focus on managing the disease long-term. Your efforts will center on preventing future attacks, avoiding the long-term damage to your obat kelenjar tiroid joints and chronic pain associated with uncontrolled gout and preventing the formation of tophi, lumps of crystallized uric acid that can form in the affected joints or surrounding tissues.
What resources are available?

Toko obat herbal JELLY GAMAT GOLD-G di bandung.

Jika ditampar sekali kena denda emas, dua kali setampar emas pula, lebih baik ditampar betul-betul. Artinya Setiap perbuatan jahat itu sama saja akibatnya, meski besar ataupun kecil. toko obat jelly gamat gold-g di bandung

khasiat agaricpro.

very interesting post
I was very impressed with you
thanks for sharing
Khasiat Agaricpro

obat herbal varikokel tanpa operasi.

posts are very interesting to see
I was amazed to you
thanks for sharing
Obat Herbal Varikokel Tanpa Operasi

Pingback. [...] GSoC 2010 project aiming at implementing multiple language support for autodoc. But according to this blog post, the project wasn’t completed. The developer chose to work on another GSoC [...]

Post new comment

The content of this field is kept private and will not be shown publicly.
  • Web page addresses and e-mail addresses turn into links automatically.
  • Allowed HTML tags: <a> <em> <strong> <cite> <code> <ul> <ol> <li> <dl> <dt> <dd> <blockquote> <pre> <i> <b>
  • Lines and paragraphs break automatically.
By submitting this form, you accept the Mollom privacy policy.

Recent comments